Modeling the multi-scale mechanisms of macromolecular resource allocation

Laurence Yang, James T. Yurkovich, Zachary A. King, Bernhard O. Palsson

Rannsóknarafurð: Framlag til fræðitímaritsYfirlitsgreinritrýni

21 Tilvitnanir (Scopus)

Útdráttur

As microbes face changing environments, they dynamically allocate macromolecular resources to produce a particular phenotypic state. Broad ‘omics’ data sets have revealed several interesting phenomena regarding how the proteome is allocated under differing conditions, but the functional consequences of these states and how they are achieved remain open questions. Various types of multi-scale mathematical models have been used to elucidate the genetic basis for systems-level adaptations. In this review, we outline several different strategies by which microbes accomplish resource allocation and detail how mathematical models have aided in our understanding of these processes. Ultimately, such modeling efforts have helped elucidate the principles of proteome allocation and hold promise for further discovery.

Upprunalegt tungumálEnska
Síður (frá-til)8-15
Síðufjöldi8
FræðitímaritCurrent Opinion in Microbiology
Bindi45
DOI
ÚtgáfustaðaÚtgefið - 1 okt. 2018

Athugasemd

Funding Information:
This work was supported by the National Institute of General Medical Sciences of the National Institutes of Health Grants U01 GM102098 and R01 GM057089, and Novo Nordisk Foundation Grant NNF10CC1016517.

Funding Information:
This work was supported by the National Institute of General Medical Sciences of the National Institutes of Health Grants U01 GM102098 and R01 GM057089, and Novo Nordisk Foundation Grant NNF10CC1016517.

Publisher Copyright:
© 2018

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