Isolation by distance, based on microsatellite data, tested with spatial autocorrelation (SPAIDA) and assignment test (SPASSIGN)

Rannsóknarafurð: Framlag til fræðitímaritsGreinritrýni

12 Tilvitnanir (Scopus)

Útdráttur

SPASSIGN and SPAIDA are two small programs useful to detect isolate by distance of microsatellite loci. The programs are written in C and are available for Linux and Windows system at http://www.hi.is/~snaebj/programs. html. SPAIDA calculates two estimates of spatial autocorrelation, Moran's I and Geary's c, first by assuming the infinite allele model, and second by assuming a stepwise mutational model. SPASSIGN calculates the assignment probabilities of an individuals genotype to the location where it was sampled and compares probabilities of assignment to other locations. Genetic distances among regions based on the overall differences in likelihoods are calculated.

Upprunalegt tungumálEnska
Síður (frá-til)143-145
Síðufjöldi3
FræðitímaritMolecular Ecology Notes
Bindi4
Númer tölublaðs1
DOI
ÚtgáfustaðaÚtgefið - mar. 2004

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