TY - JOUR
T1 - Interactive graph-cut segmentation for fast creation of finite element models from clinical ct data for hip fracture prediction
AU - Pauchard, Yves
AU - Fitze, Thomas
AU - Browarnik, Diego
AU - Eskandari, Amiraslan
AU - Pauchard, Irene
AU - Enns-Bray, William
AU - Pálsson, Halldór
AU - Sigurdsson, Sigurdur
AU - Ferguson, Stephen J.
AU - Harris, Tamara B.
AU - Gudnason, Vilmundur
AU - Helgason, Benedikt
N1 - Publisher Copyright:
© 2016 Informa UK Limited, trading as Taylor & Francis Group.
PY - 2016/12/9
Y1 - 2016/12/9
N2 - In this study, we propose interactive graph cut image segmentation for fast creation of femur finite element (FE) models from clinical computed tomography scans for hip fracture prediction. Using a sample of N = 48 bone scans representing normal, osteopenic and osteoporotic subjects, the proximal femur was segmented using manual (gold standard) and graph cut segmentation. Segmentations were subsequently used to generate FE models to calculate overall stiffness and peak force in a sideways fall simulations. Results show that, comparable FE results can be obtained with the graph cut method, with a reduction from 20 to 2–5 min interaction time. Average differences between segmentation methods of 0.22 mm were not significantly correlated with differences in FE derived stiffness (R2 = 0.08, p = 0.05) and weakly correlated to differences in FE derived peak force (R2 = 0.16, p = 0.01). We further found that changes in automatically assigned boundary conditions as a consequence of small segmentation differences were significantly correlated with FE derived results. The proposed interactive graph cut segmentation software MITK-GEM is freely available online at https://simtk.org/home/mitk-gem.
AB - In this study, we propose interactive graph cut image segmentation for fast creation of femur finite element (FE) models from clinical computed tomography scans for hip fracture prediction. Using a sample of N = 48 bone scans representing normal, osteopenic and osteoporotic subjects, the proximal femur was segmented using manual (gold standard) and graph cut segmentation. Segmentations were subsequently used to generate FE models to calculate overall stiffness and peak force in a sideways fall simulations. Results show that, comparable FE results can be obtained with the graph cut method, with a reduction from 20 to 2–5 min interaction time. Average differences between segmentation methods of 0.22 mm were not significantly correlated with differences in FE derived stiffness (R2 = 0.08, p = 0.05) and weakly correlated to differences in FE derived peak force (R2 = 0.16, p = 0.01). We further found that changes in automatically assigned boundary conditions as a consequence of small segmentation differences were significantly correlated with FE derived results. The proposed interactive graph cut segmentation software MITK-GEM is freely available online at https://simtk.org/home/mitk-gem.
KW - clinical computed tomography
KW - femur segmentation
KW - Hip fracture prediction
KW - image segmentation
KW - image-based finite element modeling
UR - http://www.scopus.com/inward/record.url?scp=84966694943&partnerID=8YFLogxK
U2 - 10.1080/10255842.2016.1181173
DO - 10.1080/10255842.2016.1181173
M3 - Article
C2 - 27161828
AN - SCOPUS:84966694943
SN - 1025-5842
VL - 19
SP - 1693
EP - 1703
JO - Computer Methods in Biomechanics and Biomedical Engineering
JF - Computer Methods in Biomechanics and Biomedical Engineering
IS - 16
ER -